Reconcile project statuses against Docker on startup, update docs and CI

- Add reconcile_project_statuses command that checks actual Docker container
  state on startup, preserving Running status for containers that are genuinely
  still running and resetting stale statuses to Stopped
- Add is_container_running helper using Docker inspect API
- Frontend calls reconciliation after Docker is confirmed available
- Update TECHNICAL.md project structure, auth modes, and file listings to
  match current codebase
- Update README.md and HOW-TO-USE.md with MCP servers, Mission Control,
  file manager, bash shells, clipboard/audio shims, and progress modal docs
- Add workflow file self-triggers to CI path filters for build-app.yml
  and build.yml
- Install Mission Control skills to ~/.claude/skills/ in entrypoint

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

app/src/lib/tauri-commands.ts

@@ -24,6 +24,8 @@ export const stopProjectContainer = (projectId: string) =>
   invoke<void>("stop_project_container", { projectId });
 export const rebuildProjectContainer = (projectId: string) =>
   invoke<Project>("rebuild_project_container", { projectId });
+export const reconcileProjectStatuses = () =>
+  invoke<Project[]>("reconcile_project_statuses");
 
 // Settings
 export const getSettings = () => invoke<AppSettings>("get_settings");